STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003173annotation not available (126 aa)    
Predicted Functional Partners:
DCAF1
DDB1 and CUL4 associated factor 1.
    
 
 0.946
NTHL1
Nth like DNA glycosylase 1.
   
 0.922
DDB1
Damage specific DNA binding protein 1.
    
 
 0.878
APEX1
Apurinic/apyrimidinic endodeoxyribonuclease 1.
  
 0.876
PCNA
Proliferating cell nuclear antigen.
  
 
 0.870
ENSCAPP00000005260
annotation not available
  
 0.862
CDA
Cytidine deaminase.
     
 0.733
SSBP1
Single stranded DNA binding protein 1.
   
 
 0.727
ENSCAPP00000007180
annotation not available
  
 
 0.724
TYMS
Thymidylate synthetase.
  
 
 0.707
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.