STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXRA8Matrix remodeling associated 8. (323 aa)    
Predicted Functional Partners:
LDLRAD3
Low density lipoprotein receptor class A domain containing 3.
      
 0.560
FAM20A
FAM20A golgi associated secretory pathway pseudokinase.
     
 0.552
MEAK7
MTOR associated protein, eak-7 homolog.
      
 0.527
B3GAT3
Beta-1,3-glucuronyltransferase 3.
      
 0.476
FAM20B
FAM20B glycosaminoglycan xylosylkinase.
     
 0.476
PTPRU
Protein tyrosine phosphatase receptor type U.
      
 0.433
TMEM255B
Transmembrane protein 255B.
      
 0.424
FCN1
Ficolin 1.
   
  
 0.406
IRF1
Interferon regulatory factor 1.
     
 0.401
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.