Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MXRA8Matrix remodeling associated 8. (323 aa)    
Predicted Functional Partners:
PHB
Prohibitin.
      
 0.903
LDLRAD3
Low density lipoprotein receptor class A domain containing 3.
      
 0.840
ENSCAPP00000012169
annotation not available
      
 0.839
MEAK7
MTOR associated protein, eak-7 homolog.
      
 0.662
ACAP3
ArfGAP with coiled-coil, ankyrin repeat and PH domains 3.
      
 0.657
FAM20C
FAM20C golgi associated secretory pathway kinase.
     
  0.657
INTS11
Integrator complex subunit 11.
      
 0.657
VLDLR
Very low density lipoprotein receptor.
      
 0.613
ENSCAPP00000011462
annotation not available
   
  
 0.588
B3GAT3
Beta-1,3-glucuronyltransferase 3.
      
 0.580
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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