STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCN4ASodium voltage-gated channel alpha subunit 4. (1799 aa)    
Predicted Functional Partners:
SCN3A
Sodium voltage-gated channel alpha subunit 3.
   
 0.998
SCN1A
Sodium voltage-gated channel alpha subunit 1.
   
  0.998
SCN1B
Sodium voltage-gated channel beta subunit 1.
    
 0.998
SCN5A
Sodium voltage-gated channel alpha subunit 5.
   
 0.993
ENSCAPP00000005805
annotation not available
   
  0.986
SCN2A
Sodium voltage-gated channel alpha subunit 2.
   
  0.986
SCN9A
Sodium voltage-gated channel alpha subunit 9.
   
  0.982
SCN4B
Sodium voltage-gated channel beta subunit 4.
    
 0.982
SCN3B
Sodium voltage-gated channel beta subunit 3.
    
 0.981
SCN2B
Sodium voltage-gated channel beta subunit 2.
   
 0.981
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.