Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003177annotation not available (100 aa)    
Predicted Functional Partners:
FBXW5
F-box and WD repeat domain containing 5.
    
 
 0.662
MED4
Mediator complex subunit 4.
    
   0.622
LATS1
Large tumor suppressor kinase 1.
    
   0.618
PGM2L1
Phosphoglucomutase 2 like 1.
      
 0.612
C4orf45
Chromosome 4 open reading frame 45.
      
 0.612
TINAGL1
Tubulointerstitial nephritis antigen like 1.
      
 0.575
ENSCAPP00000017342
annotation not available
      
 0.574
DNAJC1
DnaJ heat shock protein family (Hsp40) member C1.
      
 0.568
RIC8A
RIC8 guanine nucleotide exchange factor A.
      
 0.568
ENSCAPP00000010890
annotation not available
      
 0.524
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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