Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEBP1AE binding protein 1. (1013 aa)    
Predicted Functional Partners:
FMOD
Fibromodulin.
   
 
 0.672
CPB1
Carboxypeptidase B1.
   
 
 0.635
CFAP61
Cilia and flagella associated protein 61.
      
 0.572
EDNRA
Endothelin receptor type A.
      
 0.570
POLR3H
RNA polymerase III subunit H.
    
 0.566
LRRTM4
Leucine rich repeat transmembrane neuronal 4.
     
 0.548
LRRC15
Leucine rich repeat containing 15.
    
 0.540
CHRNA5
Cholinergic receptor nicotinic alpha 5 subunit.
      
 0.538
TARS1
threonyl-tRNA synthetase 1.
      
 0.515
DCN
Decorin.
   
 
  0.509
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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