Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003188annotation not available (480 aa)    
Predicted Functional Partners:
PIGS
Phosphatidylinositol glycan anchor biosynthesis class S.
   
 0.990
GPAA1
Glycosylphosphatidylinositol anchor attachment 1.
   
 0.990
PIGT
Phosphatidylinositol glycan anchor biosynthesis class T.
   
 0.989
PIGK
Phosphatidylinositol glycan anchor biosynthesis class K.
    
 0.989
ENSCAPP00000006357
annotation not available
   
 
 0.884
PGAP1
post-GPI attachment to proteins inositol deacylase 1.
     
 0.875
KNG1
Kininogen 1.
   
    0.849
PGLYRP1
Peptidoglycan recognition protein 1.
   
 
 0.839
PIGF
Phosphatidylinositol glycan anchor biosynthesis class F.
     
 0.807
KDSR
3-ketodihydrosphingosine reductase.
     
  0.798
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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