Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MYL3Myosin light chain 3. (127 aa)    
Predicted Functional Partners:
MYL2
Myosin light chain 2.
   
 0.999
MYL1
Myosin light chain 1.
   
 
  0.997
MYL4
Myosin light chain 4.
   
  0.993
MYH8
Myosin heavy chain 8.
   
 0.982
MYH3
Myosin heavy chain 3.
   
 0.982
TNNC1
Troponin C1, slow skeletal and cardiac type.
   
  0.981
MYH14
Myosin heavy chain 14.
    
 0.981
MYH15
Myosin heavy chain 15.
   
 0.980
MYBPC3
Myosin binding protein C, cardiac.
   
 0.980
MYH7B
Myosin heavy chain 7B.
   
 0.979
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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