Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FN1Fibronectin 1. (2433 aa)    
Predicted Functional Partners:
FGB
Fibrinogen beta chain.
   
 0.982
FGG
Fibrinogen gamma chain.
   
 0.981
SDC4
Syndecan 4.
    
 0.976
ENSCAPP00000014476
annotation not available
    
 0.968
THBS1
Thrombospondin 1.
    
 0.957
ITGA5
Integrin subunit alpha 5.
    
 0.957
ITGB1
Integrin subunit beta 1.
   
 
 0.956
FGL1
Fibrinogen like 1.
    
 0.955
ITGB6
Integrin subunit beta 6.
     
 0.954
ANGPTL1
Angiopoietin like 1.
    
  0.953
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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