ENSCAPP00000003197 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCAPP00000003197

annotation not available (363 aa)

Predicted Functional Partners:

ENSCAPP00000015285

0.922

ENSCAPP00000012437

0.900

SON

0.853

RBM25

0.852

BPTF

0.665

ENSCAPP00000005247

0.636

UBAP2L

0.636

ENSCAPP00000010940

0.523

SRSF11

0.506

ENSCAPP00000010813

0.499

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BPTF	ENSCAPP00000003197	ENSCAPP00000010189	ENSCAPP00000003197	Bromodomain PHD finger transcription factor.	annotation not available	0.665
BPTF	ENSCAPP00000010813	ENSCAPP00000010189	ENSCAPP00000010813	Bromodomain PHD finger transcription factor.	annotation not available	0.519
BPTF	ENSCAPP00000010940	ENSCAPP00000010189	ENSCAPP00000010940	Bromodomain PHD finger transcription factor.	annotation not available	0.852
BPTF	ENSCAPP00000012437	ENSCAPP00000010189	ENSCAPP00000012437	Bromodomain PHD finger transcription factor.	annotation not available	0.666
BPTF	ENSCAPP00000015285	ENSCAPP00000010189	ENSCAPP00000015285	Bromodomain PHD finger transcription factor.	annotation not available	0.666
BPTF	SON	ENSCAPP00000010189	ENSCAPP00000017326	Bromodomain PHD finger transcription factor.	SON DNA binding protein.	0.412
ENSCAPP00000003197	BPTF	ENSCAPP00000003197	ENSCAPP00000010189	annotation not available	Bromodomain PHD finger transcription factor.	0.665
ENSCAPP00000003197	ENSCAPP00000005247	ENSCAPP00000003197	ENSCAPP00000005247	annotation not available	annotation not available	0.636
ENSCAPP00000003197	ENSCAPP00000010813	ENSCAPP00000003197	ENSCAPP00000010813	annotation not available	annotation not available	0.499
ENSCAPP00000003197	ENSCAPP00000010940	ENSCAPP00000003197	ENSCAPP00000010940	annotation not available	annotation not available	0.523
ENSCAPP00000003197	ENSCAPP00000012437	ENSCAPP00000003197	ENSCAPP00000012437	annotation not available	annotation not available	0.900
ENSCAPP00000003197	ENSCAPP00000015285	ENSCAPP00000003197	ENSCAPP00000015285	annotation not available	annotation not available	0.922
ENSCAPP00000003197	RBM25	ENSCAPP00000003197	ENSCAPP00000002345	annotation not available	RNA binding motif protein 25.	0.852
ENSCAPP00000003197	SON	ENSCAPP00000003197	ENSCAPP00000017326	annotation not available	SON DNA binding protein.	0.853
ENSCAPP00000003197	SRSF11	ENSCAPP00000003197	ENSCAPP00000017995	annotation not available	Serine and arginine rich splicing factor 11.	0.506
ENSCAPP00000003197	UBAP2L	ENSCAPP00000003197	ENSCAPP00000007935	annotation not available	Ubiquitin associated protein 2 like.	0.636
ENSCAPP00000005247	ENSCAPP00000003197	ENSCAPP00000005247	ENSCAPP00000003197	annotation not available	annotation not available	0.636
ENSCAPP00000005247	ENSCAPP00000010813	ENSCAPP00000005247	ENSCAPP00000010813	annotation not available	annotation not available	0.401
ENSCAPP00000005247	ENSCAPP00000012437	ENSCAPP00000005247	ENSCAPP00000012437	annotation not available	annotation not available	0.636
ENSCAPP00000005247	ENSCAPP00000015285	ENSCAPP00000005247	ENSCAPP00000015285	annotation not available	annotation not available	0.636