HAT1 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Gene Fusion

Co-occurrence

Co-expression

Experiments

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[Homology]

Score

HAT1

Histone acetyltransferase 1. (347 aa)

Predicted Functional Partners:

ENSCAPP00000001550

0.995

ASF1A

0.982

ASF1B

0.978

BAP1

0.964

ENSCAPP00000001714

0.951

ENSCAPP00000004252

0.951

ENSCAPP00000006354

0.951

ENSCAPP00000015067

0.951

ENSCAPP00000005081

0.943

ENSCAPP00000005146

0.943

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASF1A	ASF1B	ENSCAPP00000005345	ENSCAPP00000004210	Anti-silencing function 1A histone chaperone.	Anti-silencing function 1B histone chaperone.	0.965
ASF1A	ENSCAPP00000001550	ENSCAPP00000005345	ENSCAPP00000001550	Anti-silencing function 1A histone chaperone.	annotation not available	0.923
ASF1A	ENSCAPP00000001714	ENSCAPP00000005345	ENSCAPP00000001714	Anti-silencing function 1A histone chaperone.	annotation not available	0.846
ASF1A	ENSCAPP00000004252	ENSCAPP00000005345	ENSCAPP00000004252	Anti-silencing function 1A histone chaperone.	annotation not available	0.846
ASF1A	ENSCAPP00000005081	ENSCAPP00000005345	ENSCAPP00000005081	Anti-silencing function 1A histone chaperone.	annotation not available	0.858
ASF1A	ENSCAPP00000005146	ENSCAPP00000005345	ENSCAPP00000005146	Anti-silencing function 1A histone chaperone.	annotation not available	0.858
ASF1A	ENSCAPP00000006354	ENSCAPP00000005345	ENSCAPP00000006354	Anti-silencing function 1A histone chaperone.	annotation not available	0.846
ASF1A	ENSCAPP00000015067	ENSCAPP00000005345	ENSCAPP00000015067	Anti-silencing function 1A histone chaperone.	annotation not available	0.846
ASF1A	HAT1	ENSCAPP00000005345	ENSCAPP00000003201	Anti-silencing function 1A histone chaperone.	Histone acetyltransferase 1.	0.982
ASF1B	ASF1A	ENSCAPP00000004210	ENSCAPP00000005345	Anti-silencing function 1B histone chaperone.	Anti-silencing function 1A histone chaperone.	0.965
ASF1B	ENSCAPP00000001550	ENSCAPP00000004210	ENSCAPP00000001550	Anti-silencing function 1B histone chaperone.	annotation not available	0.923
ASF1B	ENSCAPP00000001714	ENSCAPP00000004210	ENSCAPP00000001714	Anti-silencing function 1B histone chaperone.	annotation not available	0.708
ASF1B	ENSCAPP00000004252	ENSCAPP00000004210	ENSCAPP00000004252	Anti-silencing function 1B histone chaperone.	annotation not available	0.708
ASF1B	ENSCAPP00000005081	ENSCAPP00000004210	ENSCAPP00000005081	Anti-silencing function 1B histone chaperone.	annotation not available	0.721
ASF1B	ENSCAPP00000005146	ENSCAPP00000004210	ENSCAPP00000005146	Anti-silencing function 1B histone chaperone.	annotation not available	0.721
ASF1B	ENSCAPP00000006354	ENSCAPP00000004210	ENSCAPP00000006354	Anti-silencing function 1B histone chaperone.	annotation not available	0.708
ASF1B	ENSCAPP00000015067	ENSCAPP00000004210	ENSCAPP00000015067	Anti-silencing function 1B histone chaperone.	annotation not available	0.708
ASF1B	HAT1	ENSCAPP00000004210	ENSCAPP00000003201	Anti-silencing function 1B histone chaperone.	Histone acetyltransferase 1.	0.978
BAP1	ENSCAPP00000001550	ENSCAPP00000016694	ENSCAPP00000001550	BRCA1 associated protein 1.	annotation not available	0.755
BAP1	ENSCAPP00000001714	ENSCAPP00000016694	ENSCAPP00000001714	BRCA1 associated protein 1.	annotation not available	0.934