STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HAT1Histone acetyltransferase 1. (347 aa)    
Predicted Functional Partners:
ENSCAPP00000001550
annotation not available
    
 0.999
ORC5
Origin recognition complex subunit 5.
    
 
 0.951
ENSCAPP00000001714
annotation not available
   
 0.947
ENSCAPP00000004252
annotation not available
   
 0.947
ENSCAPP00000006354
annotation not available
   
 0.947
ENSCAPP00000015067
annotation not available
   
 0.947
ORC4
Origin recognition complex subunit 4.
    
 
 0.941
ORC2
Origin recognition complex subunit 2.
   
 
 0.940
WDR73
WD repeat domain 73.
   
 0.931
ORC1
Origin recognition complex subunit 1.
   
 
 0.910
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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