STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIPT1Lipoyltransferase 1. (373 aa)    
Predicted Functional Partners:
ENSCAPP00000010034
annotation not available
   
 0.981
ENSCAPP00000010350
annotation not available
  
 
 0.970
OXSM
3-oxoacyl-ACP synthase, mitochondrial.
    
 0.929
KCNE3
Potassium voltage-gated channel subfamily E regulatory subunit 3.
   
 0.927
ENSCAPP00000012562
annotation not available
  
 
 0.921
DLAT
Dihydrolipoamide S-acetyltransferase.
  
 0.917
ACSM1
acyl-CoA synthetase medium chain family member 1.
    
 0.916
ENSCAPP00000010045
annotation not available
  
 
 0.906
MECR
Mitochondrial trans-2-enoyl-CoA reductase.
    
 0.901
PDHX
Pyruvate dehydrogenase complex component X.
  
 0.894
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.