STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIPT1Lipoyltransferase 1. (373 aa)    
Predicted Functional Partners:
DLAT
Dihydrolipoamide S-acetyltransferase.
  
 0.995
ENSCAPP00000010034
annotation not available
   
 0.988
ENSCAPP00000010350
annotation not available
  
 
 0.982
OXSM
3-oxoacyl-ACP synthase, mitochondrial.
    
 0.933
MECR
Mitochondrial trans-2-enoyl-CoA reductase.
    
 0.927
ACSM1
acyl-CoA synthetase medium chain family member 1.
    
 0.921
KCNE3
Potassium voltage-gated channel subfamily E regulatory subunit 3.
   
 0.916
ENSCAPP00000008758
annotation not available
    
 0.914
PDHX
Pyruvate dehydrogenase complex component X.
  
 0.897
ENSCAPP00000009659
annotation not available
    
 0.870
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.