Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RIPOR1RHO family interacting cell polarization regulator 1. (811 aa)    
Predicted Functional Partners:
ENSCAPP00000009157
annotation not available
    
   0.959
NDUFA12
NADH:ubiquinone oxidoreductase subunit A12.
    
   0.958
PDCD10
Programmed cell death 10.
    
 
 0.836
STK25
Serine/threonine kinase 25.
    
 
 0.826
STK24
Serine/threonine kinase 24.
    
 
 0.812
ENSCAPP00000000576
annotation not available
   
  0.782
ENSCAPP00000004781
annotation not available
   
  0.782
STK26
Serine/threonine kinase 26.
    
 
 0.765
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.719
ZMYM5
Zinc finger MYM-type containing 5.
    
 0.637
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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