STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPT1CCarnitine palmitoyltransferase 1C. (775 aa)    
Predicted Functional Partners:
ABHD6
Abhydrolase domain containing 6.
     
 0.926
CPT2
Carnitine palmitoyltransferase 2.
  
  
0.924
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
     
 0.919
ACSL1
acyl-CoA synthetase long chain family member 1.
     
 0.915
CPT1B
Carnitine palmitoyltransferase 1B.
  
  
 
0.910
CPT1A
Carnitine palmitoyltransferase 1A.
  
  
 
0.909
GRIA3
Glutamate ionotropic receptor AMPA type subunit 3.
     
 0.904
ABHD12
Abhydrolase domain containing 12.
     
 0.904
SACM1L
SAC1 like phosphatidylinositide phosphatase.
     
 0.880
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
     
 0.863
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.