STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003217annotation not available (199 aa)    
Predicted Functional Partners:
ENSCAPP00000013295
annotation not available
  
 
0.954
BACE1
Beta-secretase 1.
   
 0.941
BACE2
Beta-secretase 2.
   
 0.891
LINGO1
Leucine rich repeat and Ig domain containing 1.
    
 0.803
OMG
Oligodendrocyte myelin glycoprotein.
    
 0.801
MAG
Myelin associated glycoprotein.
     
 0.781
NGFR
Nerve growth factor receptor.
     
 0.781
RTN4R
Reticulon 4 receptor.
    
 0.761
GCH1
GTP cyclohydrolase 1.
    
   0.671
REEP6
Receptor accessory protein 6.
    
 
 0.668
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.