BAMBI protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Experiments

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[Homology]

Score

BAMBI

BMP and activin membrane bound inhibitor. (249 aa)

Predicted Functional Partners:

ENSCAPP00000008686

0.961

ACVR1

0.939

DVL2

0.937

TGFBR1

0.937

BMPR1A

0.937

BMPR1B

0.935

LRP6

0.933

ACVR1B

0.932

DVL3

0.931

LRP5

0.929

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACVR1	ACVR1B	ENSCAPP00000016968	ENSCAPP00000017747	Activin A receptor type 1.	Activin A receptor type 1B.	0.996
ACVR1	BAMBI	ENSCAPP00000016968	ENSCAPP00000003222	Activin A receptor type 1.	BMP and activin membrane bound inhibitor.	0.939
ACVR1	BMPR1A	ENSCAPP00000016968	ENSCAPP00000015556	Activin A receptor type 1.	Bone morphogenetic protein receptor type 1A.	0.996
ACVR1	BMPR1B	ENSCAPP00000016968	ENSCAPP00000015383	Activin A receptor type 1.	Bone morphogenetic protein receptor type 1B.	0.988
ACVR1	ENSCAPP00000008686	ENSCAPP00000016968	ENSCAPP00000008686	Activin A receptor type 1.	annotation not available	0.890
ACVR1	TGFBR1	ENSCAPP00000016968	ENSCAPP00000007858	Activin A receptor type 1.	Transforming growth factor beta receptor 1.	0.955
ACVR1B	ACVR1	ENSCAPP00000017747	ENSCAPP00000016968	Activin A receptor type 1B.	Activin A receptor type 1.	0.996
ACVR1B	BAMBI	ENSCAPP00000017747	ENSCAPP00000003222	Activin A receptor type 1B.	BMP and activin membrane bound inhibitor.	0.932
ACVR1B	DVL2	ENSCAPP00000017747	ENSCAPP00000005823	Activin A receptor type 1B.	Dishevelled segment polarity protein 2.	0.411
ACVR1B	DVL3	ENSCAPP00000017747	ENSCAPP00000006593	Activin A receptor type 1B.	Dishevelled segment polarity protein 3.	0.411
ACVR1B	ENSCAPP00000008686	ENSCAPP00000017747	ENSCAPP00000008686	Activin A receptor type 1B.	annotation not available	0.989
ACVR1B	TGFBR1	ENSCAPP00000017747	ENSCAPP00000007858	Activin A receptor type 1B.	Transforming growth factor beta receptor 1.	0.956
BAMBI	ACVR1	ENSCAPP00000003222	ENSCAPP00000016968	BMP and activin membrane bound inhibitor.	Activin A receptor type 1.	0.939
BAMBI	ACVR1B	ENSCAPP00000003222	ENSCAPP00000017747	BMP and activin membrane bound inhibitor.	Activin A receptor type 1B.	0.932
BAMBI	BMPR1A	ENSCAPP00000003222	ENSCAPP00000015556	BMP and activin membrane bound inhibitor.	Bone morphogenetic protein receptor type 1A.	0.937
BAMBI	BMPR1B	ENSCAPP00000003222	ENSCAPP00000015383	BMP and activin membrane bound inhibitor.	Bone morphogenetic protein receptor type 1B.	0.935
BAMBI	DVL2	ENSCAPP00000003222	ENSCAPP00000005823	BMP and activin membrane bound inhibitor.	Dishevelled segment polarity protein 2.	0.937
BAMBI	DVL3	ENSCAPP00000003222	ENSCAPP00000006593	BMP and activin membrane bound inhibitor.	Dishevelled segment polarity protein 3.	0.931
BAMBI	ENSCAPP00000008686	ENSCAPP00000003222	ENSCAPP00000008686	BMP and activin membrane bound inhibitor.	annotation not available	0.961
BAMBI	LRP5	ENSCAPP00000003222	ENSCAPP00000017554	BMP and activin membrane bound inhibitor.	LDL receptor related protein 5.	0.929