Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSBPL3Oxysterol binding protein like 3. (766 aa)    
Predicted Functional Partners:
VAPB
VAMP associated protein B and C.
    
 
 0.964
OSBPL6
Oxysterol binding protein like 6.
    
   0.868
VAPA
VAMP associated protein A.
    
 
 0.864
PITPNM3
PITPNM family member 3.
    
 
 0.769
CASP9
Caspase 9.
      
 0.760
APAF1
Apoptotic peptidase activating factor 1.
      
 0.760
NDUFA12
NADH:ubiquinone oxidoreductase subunit A12.
      
 0.698
ABCF1
ATP binding cassette subfamily F member 1.
      
 0.690
GJA1
Gap junction protein alpha 1.
      
 0.688
GAK
Cyclin G associated kinase.
   
 
 0.678
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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