Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PYGBGlycogen phosphorylase B. (823 aa)    
Predicted Functional Partners:
AGL
Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase.
  
 0.991
PYGL
Glycogen phosphorylase L.
   
 0.984
GBE1
1,4-alpha-glucan branching enzyme 1.
  
 0.976
PGM1
Phosphoglucomutase 1.
  
 
 0.968
CALML3
Calmodulin like 3.
    
  0.936
GYS1
Glycogen synthase 1.
  
 0.936
PGM5
Phosphoglucomutase 5.
  
 
 0.930
PHKG1
Phosphorylase kinase catalytic subunit gamma 1.
   
 0.927
UGP2
UDP-glucose pyrophosphorylase 2.
  
 
 0.924
GYS2
Glycogen synthase 2.
  
 0.919
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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