STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003244annotation not available (224 aa)    
Predicted Functional Partners:
ENSCAPP00000014655
annotation not available
    
 
 0.988
HIBCH
3-hydroxyisobutyryl-CoA hydrolase.
    
   0.696
ACOT12
acyl-CoA thioesterase 12.
    
   0.675
ACOT11
acyl-CoA thioesterase 11.
    
   0.675
ACOT7
acyl-CoA thioesterase 7.
    
   0.675
HOOK3
Hook microtubule tethering protein 3.
    
   0.656
ENSCAPP00000002955
annotation not available
    
 
 0.620
ENSCAPP00000008904
annotation not available
    
   0.618
RLIM
Ring finger protein, LIM domain interacting.
    
 
 0.597
ZNF597
Zinc finger protein 597.
    
 
 0.583
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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