Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003247annotation not available (332 aa)    
Predicted Functional Partners:
SPCS3
Signal peptidase complex subunit 3.
    
   0.889
PLA2G4A
Phospholipase A2 group IVA.
    
 0.737
SLC22A18
Solute carrier family 22 member 18.
   
 0.722
XYLB
Xylulokinase.
      
 0.712
SLC16A14
Solute carrier family 16 member 14.
    
 
 0.699
SLC16A6
Solute carrier family 16 member 6.
    
 
 0.688
SLC34A1
Solute carrier family 34 member 1.
   
 0.668
INTS1
Integrator complex subunit 1.
    
 0.607
INTS9
Integrator complex subunit 9.
    
 0.603
INTS11
Integrator complex subunit 11.
    
 0.602
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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