STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDK2AP1Cyclin dependent kinase 2 associated protein 1. (87 aa)    
Predicted Functional Partners:
HDAC1
Histone deacetylase 1.
   
 
 0.900
GATAD2A
GATA zinc finger domain containing 2A.
    
 
 0.887
GATAD2B
GATA zinc finger domain containing 2B.
    
 
 0.856
HDAC2
Histone deacetylase 2.
   
 
 0.789
CHD3
Chromodomain helicase DNA binding protein 3.
    
 
 0.771
ZNF219
Zinc finger protein 219.
    
   0.753
ENSCAPP00000005542
annotation not available
    
 
 0.745
MTA1
Metastasis associated 1.
    
 
 0.665
MBD3
methyl-CpG binding domain protein 3.
   
 
 0.664
MTA2
Metastasis associated 1 family member 2.
    
 
 0.663
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.