GCAT protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

GCAT

Glycine C-acetyltransferase. (370 aa)

Predicted Functional Partners:

ENSCAPP00000014844

0.971

AGXT

0.957

GLDC

0.941

ENSCAPP00000014634

0.941

SARDH

0.941

ENSCAPP00000002410

0.940

AGXT2

0.939

ECSIT

0.934

PIPOX

0.933

SHMT1

0.933

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGXT	AGXT2	ENSCAPP00000017903	ENSCAPP00000000131	Alanine--glyoxylate and serine--pyruvate aminotransferase.	Alanine--glyoxylate aminotransferase 2.	0.993
AGXT	ENSCAPP00000002410	ENSCAPP00000017903	ENSCAPP00000002410	Alanine--glyoxylate and serine--pyruvate aminotransferase.	annotation not available	0.953
AGXT	ENSCAPP00000014634	ENSCAPP00000017903	ENSCAPP00000014634	Alanine--glyoxylate and serine--pyruvate aminotransferase.	annotation not available	0.934
AGXT	GCAT	ENSCAPP00000017903	ENSCAPP00000003250	Alanine--glyoxylate and serine--pyruvate aminotransferase.	Glycine C-acetyltransferase.	0.957
AGXT	GLDC	ENSCAPP00000017903	ENSCAPP00000000587	Alanine--glyoxylate and serine--pyruvate aminotransferase.	Glycine decarboxylase.	0.956
AGXT	PIPOX	ENSCAPP00000017903	ENSCAPP00000003477	Alanine--glyoxylate and serine--pyruvate aminotransferase.	Pipecolic acid and sarcosine oxidase.	0.967
AGXT	SARDH	ENSCAPP00000017903	ENSCAPP00000017275	Alanine--glyoxylate and serine--pyruvate aminotransferase.	Sarcosine dehydrogenase.	0.933
AGXT	SHMT1	ENSCAPP00000017903	ENSCAPP00000010725	Alanine--glyoxylate and serine--pyruvate aminotransferase.	Serine hydroxymethyltransferase 1.	0.977
AGXT2	AGXT	ENSCAPP00000000131	ENSCAPP00000017903	Alanine--glyoxylate aminotransferase 2.	Alanine--glyoxylate and serine--pyruvate aminotransferase.	0.993
AGXT2	ENSCAPP00000002410	ENSCAPP00000000131	ENSCAPP00000002410	Alanine--glyoxylate aminotransferase 2.	annotation not available	0.940
AGXT2	ENSCAPP00000014634	ENSCAPP00000000131	ENSCAPP00000014634	Alanine--glyoxylate aminotransferase 2.	annotation not available	0.899
AGXT2	GCAT	ENSCAPP00000000131	ENSCAPP00000003250	Alanine--glyoxylate aminotransferase 2.	Glycine C-acetyltransferase.	0.939
AGXT2	GLDC	ENSCAPP00000000131	ENSCAPP00000000587	Alanine--glyoxylate aminotransferase 2.	Glycine decarboxylase.	0.959
AGXT2	PIPOX	ENSCAPP00000000131	ENSCAPP00000003477	Alanine--glyoxylate aminotransferase 2.	Pipecolic acid and sarcosine oxidase.	0.947
AGXT2	SARDH	ENSCAPP00000000131	ENSCAPP00000017275	Alanine--glyoxylate aminotransferase 2.	Sarcosine dehydrogenase.	0.940
AGXT2	SHMT1	ENSCAPP00000000131	ENSCAPP00000010725	Alanine--glyoxylate aminotransferase 2.	Serine hydroxymethyltransferase 1.	0.931
ECSIT	GCAT	ENSCAPP00000009083	ENSCAPP00000003250	ECSIT signaling integrator.	Glycine C-acetyltransferase.	0.934
ENSCAPP00000002410	AGXT	ENSCAPP00000002410	ENSCAPP00000017903	annotation not available	Alanine--glyoxylate and serine--pyruvate aminotransferase.	0.953
ENSCAPP00000002410	AGXT2	ENSCAPP00000002410	ENSCAPP00000000131	annotation not available	Alanine--glyoxylate aminotransferase 2.	0.940
ENSCAPP00000002410	ENSCAPP00000014634	ENSCAPP00000002410	ENSCAPP00000014634	annotation not available	annotation not available	0.865