Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SERPINB6Serpin family B member 6. (378 aa)    
Predicted Functional Partners:
KLK8
Kallikrein related peptidase 8.
   
 0.923
PLAU
Plasminogen activator, urokinase.
   
 0.921
SERPINE1
Serpin family E member 1.
  
  
 
0.919
PLAT
Plasminogen activator, tissue type.
   
 0.918
VTN
Vitronectin.
   
  0.910
CTSB
Cathepsin B.
   
 0.896
SERPINB13
Serpin family B member 13.
     
  0.841
ENSCAPP00000015140
annotation not available
    
 0.828
SERPINA5
Serpin family A member 5.
  
 
0.790
SERPINA3
Serpin family A member 3.
  
 
0.789
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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