Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNHIT3Zinc finger HIT-type containing 3. (112 aa)    
Predicted Functional Partners:
ENSCAPP00000012541
annotation not available
    
 0.990
NOP58
NOP58 ribonucleoprotein.
    
 0.975
PIH1D1
PIH1 domain containing 1.
     
 0.963
TAF9
TATA-box binding protein associated factor 9.
   
 
  0.890
SNU13
Small nuclear ribonucleoprotein 13.
   
 
 0.846
ENSCAPP00000007368
annotation not available
     
 0.842
ENSCAPP00000012618
annotation not available
     
 0.842
PPARG
Peroxisome proliferator activated receptor gamma.
    
   0.802
DHRS11
Dehydrogenase/reductase 11.
      
 0.685
POFUT1
Protein O-fucosyltransferase 1.
     
  0.675
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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