STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IFITM5Interferon induced transmembrane protein 5. (134 aa)    
Predicted Functional Partners:
ENSCAPP00000007144
annotation not available
      
 0.826
PGGHG
Protein-glucosylgalactosylhydroxylysine glucosidase.
   
  
 0.756
TMEM170B
Transmembrane protein 170B.
      
 0.685
LAMP1
Lysosomal associated membrane protein 1.
    
 
 0.652
SP7
Sp7 transcription factor.
    
 
 0.613
SERPINF1
Serpin family F member 1.
    
 0.592
FKBP10
FKBP prolyl isomerase 10.
    
 
 0.588
TMEM38B
Transmembrane protein 38B.
      
 0.572
CTSA
Cathepsin A.
   
 0.560
CPVL
Carboxypeptidase vitellogenic like.
   
 0.560
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.