STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IFITM5Interferon induced transmembrane protein 5. (134 aa)    
Predicted Functional Partners:
ENSCAPP00000011344
annotation not available
    
 
 0.599
LAMP1
Lysosomal associated membrane protein 1.
    
 
 0.586
CTSA
Cathepsin A.
   
 0.575
CPVL
Carboxypeptidase vitellogenic like.
   
 0.575
CTSF
Cathepsin F.
   
 0.554
CTSO
Cathepsin O.
   
 0.554
CTSW
Cathepsin W.
   
 0.554
TMEM170B
Transmembrane protein 170B.
      
 0.545
ENSCAPP00000007144
annotation not available
      
 0.544
ENSCAPP00000008344
annotation not available
    
 0.533
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.