Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003261annotation not available (116 aa)    
Predicted Functional Partners:
ENSCAPP00000004632
annotation not available
    
 
 0.981
ENSCAPP00000000177
annotation not available
    
 
 0.928
GNPTAB
N-acetylglucosamine-1-phosphate transferase subunits alpha and beta.
    
   0.923
IL10RB
Interleukin 10 receptor subunit beta.
    
 
 0.878
TP53BP2
Tumor protein p53 binding protein 2.
    
 
 0.878
NCK2
NCK adaptor protein 2.
    
   0.865
FRMD6
FERM domain containing 6.
    
   0.841
ENSCAPP00000000802
annotation not available
    
   0.765
PPP1CA
Protein phosphatase 1 catalytic subunit alpha.
    
   0.765
PPP1R13L
Protein phosphatase 1 regulatory subunit 13 like.
    
 
 0.707
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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