Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
POC5POC5 centriolar protein. (519 aa)    
Predicted Functional Partners:
WDR90
WD repeat domain 90.
    
 
 0.951
CETN1
Centrin 1.
    
 
 0.915
ENSCAPP00000002934
annotation not available
    
 
 0.915
ENSCAPP00000005482
annotation not available
    
 
 0.915
CEP76
Centrosomal protein 76.
      
 0.787
MYH9
Myosin heavy chain 9.
    
   0.785
NOP58
NOP58 ribonucleoprotein.
    
   0.785
POC1B
POC1 centriolar protein B.
   
 
 0.767
CEP120
Centrosomal protein 120.
   
 
 0.741
ENSCAPP00000010631
annotation not available
   
  
 0.708
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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