Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FSD2Fibronectin type III and SPRY domain containing 2. (696 aa)    
Predicted Functional Partners:
ENSCAPP00000011046
annotation not available
    
 
 0.914
ENSCAPP00000011361
annotation not available
    
 
 0.914
SPATC1L
Spermatogenesis and centriole associated 1 like.
    
   0.695
ZSCAN2
Zinc finger and SCAN domain containing 2.
    
 0.639
TRIM42
Tripartite motif containing 42.
      
 0.623
POLL
DNA polymerase lambda.
    
   0.622
TRIM9
Tripartite motif containing 9.
    
 
 0.549
ENSCAPP00000013317
annotation not available
    
 0.540
LRRC2
Leucine rich repeat containing 2.
   
 0.501
ENSCAPP00000001101
annotation not available
    
  0.497
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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