Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
REXO2RNA exonuclease 2. (188 aa)    
Predicted Functional Partners:
REXO1
RNA exonuclease 1 homolog.
   
 0.968
TBL2
Transducin beta like 2.
     
  0.850
ENSCAPP00000010861
annotation not available
     
  0.833
REXO4
REX4 homolog, 3'-5' exonuclease.
   
 0.749
NDUFAF1
NADH:ubiquinone oxidoreductase complex assembly factor 1.
   
 
  0.682
ZBTB16
Zinc finger and BTB domain containing 16.
      
 0.671
SSBP1
Single stranded DNA binding protein 1.
  
 
 0.669
ENSCAPP00000006541
annotation not available
    
   0.639
BLM
BLM RecQ like helicase.
     
 0.613
ERI1
Exoribonuclease 1.
   
  
 0.610
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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