Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DNAH11Dynein axonemal heavy chain 11. (3853 aa)    
Predicted Functional Partners:
DNAI1
Dynein axonemal intermediate chain 1.
  
 0.978
DNAI2
Dynein axonemal intermediate chain 2.
   
 0.967
C4orf47
Chromosome 4 open reading frame 47.
    
 
 0.945
DNAH1
Dynein axonemal heavy chain 1.
   
 0.938
DRC1
Dynein regulatory complex subunit 1.
   
 0.936
WDR63
WD repeat domain 63.
   
 0.936
CCDC65
Coiled-coil domain containing 65.
   
 0.936
DNALI1
Dynein axonemal light intermediate chain 1.
  
 0.918
ENSCAPP00000011153
annotation not available
   
 0.913
SOD1
Superoxide dismutase 1.
     
  0.911
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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