ENSCAPP00000003278 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSCAPP00000003278

annotation not available (713 aa)

Predicted Functional Partners:

HEATR1

0.646

MYSM1

0.625

ENSCAPP00000004325

0.610

MDN1

0.586

UTP20

0.581

ENSCAPP00000003872

0.578

MPHOSPH10

0.569

TRAF7

0.544

NOP58

0.533

CDK1

0.532

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDK1	ENSCAPP00000003278	ENSCAPP00000003998	ENSCAPP00000003278	Cyclin dependent kinase 1.	annotation not available	0.532
CDK1	MYSM1	ENSCAPP00000003998	ENSCAPP00000004064	Cyclin dependent kinase 1.	Myb like, SWIRM and MPN domains 1.	0.527
ENSCAPP00000003278	CDK1	ENSCAPP00000003278	ENSCAPP00000003998	annotation not available	Cyclin dependent kinase 1.	0.532
ENSCAPP00000003278	ENSCAPP00000003872	ENSCAPP00000003278	ENSCAPP00000003872	annotation not available	annotation not available	0.578
ENSCAPP00000003278	ENSCAPP00000004325	ENSCAPP00000003278	ENSCAPP00000004325	annotation not available	annotation not available	0.610
ENSCAPP00000003278	HEATR1	ENSCAPP00000003278	ENSCAPP00000010163	annotation not available	HEAT repeat containing 1.	0.646
ENSCAPP00000003278	MDN1	ENSCAPP00000003278	ENSCAPP00000001056	annotation not available	Midasin AAA ATPase 1.	0.586
ENSCAPP00000003278	MPHOSPH10	ENSCAPP00000003278	ENSCAPP00000001852	annotation not available	M-phase phosphoprotein 10.	0.569
ENSCAPP00000003278	MYSM1	ENSCAPP00000003278	ENSCAPP00000004064	annotation not available	Myb like, SWIRM and MPN domains 1.	0.625
ENSCAPP00000003278	NOP58	ENSCAPP00000003278	ENSCAPP00000012279	annotation not available	NOP58 ribonucleoprotein.	0.533
ENSCAPP00000003278	TRAF7	ENSCAPP00000003278	ENSCAPP00000018018	annotation not available	TNF receptor associated factor 7.	0.544
ENSCAPP00000003278	UTP20	ENSCAPP00000003278	ENSCAPP00000014626	annotation not available	UTP20 small subunit processome component.	0.581
ENSCAPP00000003872	ENSCAPP00000003278	ENSCAPP00000003872	ENSCAPP00000003278	annotation not available	annotation not available	0.578
ENSCAPP00000003872	ENSCAPP00000004325	ENSCAPP00000003872	ENSCAPP00000004325	annotation not available	annotation not available	0.577
ENSCAPP00000003872	HEATR1	ENSCAPP00000003872	ENSCAPP00000010163	annotation not available	HEAT repeat containing 1.	0.569
ENSCAPP00000003872	MDN1	ENSCAPP00000003872	ENSCAPP00000001056	annotation not available	Midasin AAA ATPase 1.	0.408
ENSCAPP00000003872	MPHOSPH10	ENSCAPP00000003872	ENSCAPP00000001852	annotation not available	M-phase phosphoprotein 10.	0.476
ENSCAPP00000003872	NOP58	ENSCAPP00000003872	ENSCAPP00000012279	annotation not available	NOP58 ribonucleoprotein.	0.405
ENSCAPP00000003872	UTP20	ENSCAPP00000003872	ENSCAPP00000014626	annotation not available	UTP20 small subunit processome component.	0.454
ENSCAPP00000004325	ENSCAPP00000003278	ENSCAPP00000004325	ENSCAPP00000003278	annotation not available	annotation not available	0.610