STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAXIP1PAX interacting protein 1. (1051 aa)    
Predicted Functional Partners:
KDM6B
Lysine demethylase 6B.
    
 0.999
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.991
ENSCAPP00000013410
annotation not available
    
 0.987
ENSCAPP00000015921
annotation not available
   
 0.987
ATM
ATM serine/threonine kinase.
   
 0.983
ENSCAPP00000001835
annotation not available
    
 0.981
ENSCAPP00000007084
annotation not available
   
 0.981
ENSCAPP00000009820
annotation not available
   
 0.974
WDR5
WD repeat domain 5.
   
 0.973
SMC6
Structural maintenance of chromosomes 6.
   
 
 0.971
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.