Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZBTB44Zinc finger and BTB domain containing 44. (572 aa)    
Predicted Functional Partners:
ENSCAPP00000015287
annotation not available
    
 
 0.842
ECM1
Extracellular matrix protein 1.
    
 
 0.817
ENSCAPP00000009599
annotation not available
      
 0.689
FAM49A
Family with sequence similarity 49 member A.
      
 0.656
SERTAD4
SERTA domain containing 4.
    
 0.653
EPHA8
EPH receptor A8.
    
 0.590
ZER1
Zyg-11 related cell cycle regulator.
   
  
 0.585
ENSCAPP00000001392
annotation not available
    
 0.579
ZSWIM8
Zinc finger SWIM-type containing 8.
      
 0.579
SSH2
Slingshot protein phosphatase 2.
    
 
 0.576
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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