STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NLRC4NLR family CARD domain containing 4. (986 aa)    
Predicted Functional Partners:
BIRC7
Baculoviral IAP repeat containing 7.
   
 0.993
ENSCAPP00000006397
annotation not available
    
 0.967
RNH1
Ribonuclease/angiogenin inhibitor 1.
   
 0.963
NLRP3
NLR family pyrin domain containing 3.
   
 0.962
BIRC2
Baculoviral IAP repeat containing 2.
   
 0.949
BIRC3
Baculoviral IAP repeat containing 3.
   
 0.949
NOD2
Nucleotide binding oligomerization domain containing 2.
   
 0.949
PRKCD
Protein kinase C delta.
    
 0.931
DHX33
DEAH-box helicase 33.
     
 0.910
CASP10
Caspase 10.
    
 0.905
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.