Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C14orf39Chromosome 14 open reading frame 39. (514 aa)    
Predicted Functional Partners:
DOCK3
Dedicator of cytokinesis 3.
      
 0.676
SYCE3
Synaptonemal complex central element protein 3.
    
 
 0.669
TEX12
Testis expressed 12.
    
 
 0.629
ENSCAPP00000003685
annotation not available
      
 0.579
SMC3
Structural maintenance of chromosomes 3.
      
 0.539
RAD9B
RAD9 checkpoint clamp component B.
      
 0.534
HSPB11
Heat shock protein family B (small) member 11.
      
 0.512
CENPS
Centromere protein S.
      
 0.454
TERB2
Telomere repeat binding bouquet formation protein 2.
      
 0.451
MSH4
mutS homolog 4.
      
 0.450
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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