STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003291annotation not available (465 aa)    
Predicted Functional Partners:
TARDBP
TAR DNA binding protein.
   
 0.776
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.753
ENSCAPP00000003050
annotation not available
  
 
 0.687
FUS
FUS RNA binding protein.
   
 
 0.683
ENSCAPP00000017678
annotation not available
   
 
 0.674
ENSCAPP00000000270
annotation not available
    
 0.664
ENSCAPP00000006586
annotation not available
    
 0.664
ENSCAPP00000013350
annotation not available
    
 0.664
ENSCAPP00000006614
annotation not available
   
 0.661
ENSCAPP00000003691
annotation not available
   
 
 0.659
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.