STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBP3Retinol binding protein 3. (1233 aa)    
Predicted Functional Partners:
RGR
Retinal G protein coupled receptor.
      
 0.714
OPN4
Opsin 4.
   
  
 0.664
RHO
Rhodopsin.
   
  
 0.662
OPTC
Opticin.
   
  
 0.640
APLP2
Amyloid beta precursor like protein 2.
      
 0.632
RCVRN
Recoverin.
   
 
 0.603
OPN1SW
Opsin 1, short wave sensitive.
   
  
 0.602
RBP1
Retinol binding protein 1.
      
 0.573
ENSCAPP00000009271
annotation not available
      
 0.573
ADRA2B
Adrenoceptor alpha 2B.
      
 0.570
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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