STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FXNFrataxin. (133 aa)    
Predicted Functional Partners:
ENSCAPP00000001262
annotation not available
    
 0.999
ENSCAPP00000008637
annotation not available
   
 0.999
ISCU
Iron-sulfur cluster assembly enzyme.
    
 0.999
SCLY
Selenocysteine lyase.
   
 0.988
FECH
Ferrochelatase.
    
 0.982
HMOX2
Heme oxygenase 2.
     
 0.928
HMOX1
Heme oxygenase 1.
     
 0.928
FDX1
Ferredoxin 1.
     
 0.864
CP
Ceruloplasmin.
     
 0.861
HEPHL1
Hephaestin like 1.
     
 0.861
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.