STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003308annotation not available (179 aa)    
Predicted Functional Partners:
TCAP
Titin-cap.
   
 0.948
ACTN2
Actinin alpha 2.
   
 0.869
MYL1
Myosin light chain 1.
   
 0.812
ENSCAPP00000013036
annotation not available
 
 
 
 0.803
WDR18
WD repeat domain 18.
   
 0.792
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.788
ENSCAPP00000016063
annotation not available
 
     0.772
TEX10
Testis expressed 10.
   
 0.767
TRIM63
Tripartite motif containing 63.
   
 
 0.749
MYL2
Myosin light chain 2.
   
 0.748
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.