STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003308annotation not available (179 aa)    
Predicted Functional Partners:
TCAP
Titin-cap.
   
 0.980
MYL2
Myosin light chain 2.
   
 0.970
MYL3
Myosin light chain 3.
   
 0.932
TRIM63
Tripartite motif containing 63.
   
 0.923
CAPN3
Calpain 3.
   
 0.896
MYLK2
Myosin light chain kinase 2.
    
 0.895
ACTN2
Actinin alpha 2.
   
 0.876
ENSCAPP00000013036
annotation not available
   
 
 0.866
ACTN1
Actinin alpha 1.
   
 0.865
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.861
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.