Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMIGO2Adhesion molecule with Ig like domain 2. (438 aa)    
Predicted Functional Partners:
KCNB1
Potassium voltage-gated channel subfamily B member 1.
    
 
 0.902
NTNG1
Netrin G1.
    
 0.803
B3GNT5
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5.
  
  
 0.794
RSPO2
R-spondin 2.
   
  0.763
SERPING1
Serpin family G member 1.
     
 0.709
ENSCAPP00000012370
annotation not available
      
 0.686
GMPPB
GDP-mannose pyrophosphorylase B.
   
    0.672
PCP4
Purkinje cell protein 4.
      
 0.667
EMP1
Epithelial membrane protein 1.
      
 0.667
FKBP5
FKBP prolyl isomerase 5.
   
 
 0.657
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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