ENSCAPP00000003317 protein (Cavia aperea) - STRING interaction network

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second shell of interactors

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Knowledge-based Evidence

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textmining

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co-expression

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[Homology]

Score

ENSCAPP00000003317

annotation not available (183 aa)

Predicted Functional Partners:

RBM8A

0.875

UPF1

0.850

PNN

0.850

ENSCAPP00000004582

0.850

SAP18

0.850

ENSCAPP00000008062

0.850

PYM1

0.850

CASC3

0.850

TDRD3

0.850

SMG6

0.850

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CASC3	ENSCAPP00000003317	ENSCAPP00000008930	ENSCAPP00000003317	CASC3 exon junction complex subunit.	annotation not available	0.850
CASC3	ENSCAPP00000004582	ENSCAPP00000008930	ENSCAPP00000004582	CASC3 exon junction complex subunit.	annotation not available	0.981
CASC3	ENSCAPP00000008062	ENSCAPP00000008930	ENSCAPP00000008062	CASC3 exon junction complex subunit.	annotation not available	0.936
CASC3	PNN	ENSCAPP00000008930	ENSCAPP00000004234	CASC3 exon junction complex subunit.	Pinin, desmosome associated protein.	0.991
CASC3	PYM1	ENSCAPP00000008930	ENSCAPP00000008734	CASC3 exon junction complex subunit.	PYM homolog 1, exon junction complex associated factor.	0.998
CASC3	RBM8A	ENSCAPP00000008930	ENSCAPP00000013465	CASC3 exon junction complex subunit.	RNA binding motif protein 8A.	0.999
CASC3	SAP18	ENSCAPP00000008930	ENSCAPP00000007548	CASC3 exon junction complex subunit.	Sin3A associated protein 18.	0.951
CASC3	SMG6	ENSCAPP00000008930	ENSCAPP00000016287	CASC3 exon junction complex subunit.	SMG6 nonsense mediated mRNA decay factor.	0.973
CASC3	TDRD3	ENSCAPP00000008930	ENSCAPP00000011215	CASC3 exon junction complex subunit.	Tudor domain containing 3.	0.916
CASC3	UPF1	ENSCAPP00000008930	ENSCAPP00000002851	CASC3 exon junction complex subunit.	UPF1 RNA helicase and ATPase.	0.998
ENSCAPP00000003317	CASC3	ENSCAPP00000003317	ENSCAPP00000008930	annotation not available	CASC3 exon junction complex subunit.	0.850
ENSCAPP00000003317	ENSCAPP00000004582	ENSCAPP00000003317	ENSCAPP00000004582	annotation not available	annotation not available	0.850
ENSCAPP00000003317	ENSCAPP00000008062	ENSCAPP00000003317	ENSCAPP00000008062	annotation not available	annotation not available	0.850
ENSCAPP00000003317	PNN	ENSCAPP00000003317	ENSCAPP00000004234	annotation not available	Pinin, desmosome associated protein.	0.850
ENSCAPP00000003317	PYM1	ENSCAPP00000003317	ENSCAPP00000008734	annotation not available	PYM homolog 1, exon junction complex associated factor.	0.850
ENSCAPP00000003317	RBM8A	ENSCAPP00000003317	ENSCAPP00000013465	annotation not available	RNA binding motif protein 8A.	0.875
ENSCAPP00000003317	SAP18	ENSCAPP00000003317	ENSCAPP00000007548	annotation not available	Sin3A associated protein 18.	0.850
ENSCAPP00000003317	SMG6	ENSCAPP00000003317	ENSCAPP00000016287	annotation not available	SMG6 nonsense mediated mRNA decay factor.	0.850
ENSCAPP00000003317	TDRD3	ENSCAPP00000003317	ENSCAPP00000011215	annotation not available	Tudor domain containing 3.	0.850
ENSCAPP00000003317	UPF1	ENSCAPP00000003317	ENSCAPP00000002851	annotation not available	UPF1 RNA helicase and ATPase.	0.850