Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003323annotation not available (44 aa)    
Predicted Functional Partners:
ZMYM3
Zinc finger MYM-type containing 3.
      
 0.936
ZMYM2
Zinc finger MYM-type containing 2.
      
 0.900
PGBD5
piggyBac transposable element derived 5.
      
 0.887
GIN1
Gypsy retrotransposon integrase 1.
      
 0.883
ENSCAPP00000004791
annotation not available
      
 0.882
FCER1G
Fc fragment of IgE receptor Ig.
   
 0.781
SORL1
Sortilin related receptor 1.
    
 0.773
RAG1
Recombination activating 1.
      
 0.692
ENSCAPP00000012517
annotation not available
      
 0.690
PIGZ
Phosphatidylinositol glycan anchor biosynthesis class Z.
      
 0.689
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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