STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003323annotation not available (44 aa)    
Predicted Functional Partners:
SORL1
Sortilin related receptor 1.
    
 0.832
PTK7
Protein tyrosine kinase 7 (inactive).
    
 0.790
NTF3
Neurotrophin 3.
    
 0.714
NGF
Nerve growth factor.
    
 0.714
FCER1G
Fc fragment of IgE receptor Ig.
   
 
 0.623
NGFR
Nerve growth factor receptor.
    
  0.613
ZMYM3
Zinc finger MYM-type containing 3.
      
 0.567
BDNF
Brain derived neurotrophic factor.
     
 0.565
ZMYM2
Zinc finger MYM-type containing 2.
      
 0.565
PGBD5
piggyBac transposable element derived 5.
      
 0.565
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.