STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BMERB1bMERB domain containing 1. (113 aa)    
Predicted Functional Partners:
ENSCAPP00000008774
annotation not available
    
   0.935
DCTN4
Dynactin subunit 4.
    
   0.932
ACTR1B
Actin related protein 1B.
    
   0.928
DCTN6
Dynactin subunit 6.
    
   0.897
ACTR10
Actin related protein 10.
    
   0.847
ACTR1A
Actin related protein 1A.
    
   0.802
RAPGEF4
Rap guanine nucleotide exchange factor 4.
    
   0.740
ENSCAPP00000002552
annotation not available
      
 0.689
MARF1
Meiosis regulator and mRNA stability factor 1.
      
 0.688
FAM193B
Family with sequence similarity 193 member B.
    
   0.599
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.