STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IGSF6Immunoglobulin superfamily member 6. (217 aa)    
Predicted Functional Partners:
ENSCAPP00000016841
annotation not available
   
  
 0.612
IGSF11
Immunoglobulin superfamily member 11.
  
   
 0.577
ZDHHC22
Zinc finger DHHC-type containing 22.
      
 0.530
SASH3
SAM and SH3 domain containing 3.
   
  
 0.487
IGSF9
Immunoglobulin superfamily member 9.
      
 0.454
GNG4
G protein subunit gamma 4.
      
 0.454
ENSCAPP00000011748
annotation not available
      
 0.454
FAM133B
Family with sequence similarity 133 member B.
      
 0.454
ENSCAPP00000018574
annotation not available
      
 0.454
LY86
Lymphocyte antigen 86.
   
  
 0.451
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.