STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003356annotation not available (566 aa)    
Predicted Functional Partners:
TIMM17B
Translocase of inner mitochondrial membrane 17B.
      
 0.690
IGDCC4
Immunoglobulin superfamily DCC subclass member 4.
      
 0.690
TTLL4
Tubulin tyrosine ligase like 4.
      
 0.658
PBX2
PBX homeobox 2.
      
 0.602
TARBP2
TARBP2 subunit of RISC loading complex.
      
 0.601
USP38
Ubiquitin specific peptidase 38.
      
 0.593
HMGXB4
HMG-box containing 4.
      
 0.575
NPRL3
NPR3 like, GATOR1 complex subunit.
      
 0.568
ENSCAPP00000011290
annotation not available
      
 0.524
FOXRED2
FAD dependent oxidoreductase domain containing 2.
      
 0.517
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.