Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003357annotation not available (104 aa)    
Predicted Functional Partners:
SKA2
Spindle and kinetochore associated complex subunit 2.
    
 0.999
NDC80
NDC80 kinetochore complex component.
   
 0.997
NUF2
NUF2 component of NDC80 kinetochore complex.
   
 0.993
ENSCAPP00000003454
annotation not available
   
 
  0.991
SPC25
SPC25 component of NDC80 kinetochore complex.
   
 0.988
BUB1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 
 0.983
PLK1
Polo like kinase 1.
   
 
 0.961
ENSCAPP00000008067
annotation not available
   
 
 0.960
PPP2R2C
Protein phosphatase 2 regulatory subunit Bgamma.
    
 
 0.958
SPDL1
Spindle apparatus coiled-coil protein 1.
   
 
 0.956
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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