STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRP4LDL receptor related protein 4. (1839 aa)    
Predicted Functional Partners:
AGRN
Agrin.
    
 0.980
MUSK
Muscle associated receptor tyrosine kinase.
   
 0.857
LDLRAP1
Low density lipoprotein receptor adaptor protein 1.
    
 0.811
LRPAP1
LDL receptor related protein associated protein 1.
    
 0.799
ENSCAPP00000011420
annotation not available
    
 0.775
PCSK9
Proprotein convertase subtilisin/kexin type 9.
    
 0.747
ENSCAPP00000001307
annotation not available
    
 0.744
ENSCAPP00000009271
annotation not available
    
 0.726
ENSCAPP00000006425
annotation not available
    
 0.725
KREMEN1
Kringle containing transmembrane protein 1.
    
 0.702
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.