Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003365annotation not available (171 aa)    
Predicted Functional Partners:
ENSCAPP00000010829
annotation not available
      
 0.754
RHOBTB3
Rho related BTB domain containing 3.
      
 0.666
ATP10A
ATPase phospholipid transporting 10A (putative).
      
 0.637
ZFAT
Zinc finger and AT-hook domain containing.
      
 0.615
WDFY2
WD repeat and FYVE domain containing 2.
      
 0.608
PRELID3B
PRELI domain containing 3B.
      
 0.587
PRELID3A
PRELI domain containing 3A.
      
 0.587
SIAH1
Siah E3 ubiquitin protein ligase 1.
      
 0.566
SCAF4
SR-related CTD associated factor 4.
      
 0.522
DKKL1
Dickkopf like acrosomal protein 1.
      
 0.514
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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