STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCAREPhotoreceptor cilium actin regulator. (1215 aa)    
Predicted Functional Partners:
ENSCAPP00000013362
annotation not available
      
 0.885
IMPG2
Interphotoreceptor matrix proteoglycan 2.
      
 0.651
PRCD
Photoreceptor disc component.
      
 0.648
ARSG
Arylsulfatase G.
      
 0.638
ENSCAPP00000011103
annotation not available
      
 0.612
WASF3
WASP family member 3.
      
 0.594
ENSCAPP00000018676
annotation not available
   
  
 0.591
ENSCAPP00000010092
annotation not available
   
  
 0.583
PDE6A
Phosphodiesterase 6A.
   
  
 0.583
ZNF513
Zinc finger protein 513.
      
 0.582
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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