STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCAREPhotoreceptor cilium actin regulator. (1215 aa)    
Predicted Functional Partners:
RHO
Rhodopsin.
   
  
 0.461
ENSCAPP00000010092
annotation not available
   
  
 0.417
IMPG2
Interphotoreceptor matrix proteoglycan 2.
      
 0.416
VASP
Vasodilator stimulated phosphoprotein.
    
 
 0.415
PDE6A
Phosphodiesterase 6A.
   
  
 0.401
PSPN
Persephin.
  
     0.400
PRCD
Photoreceptor disc component.
      
 0.400
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.