STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCR3C-C motif chemokine receptor 3. (358 aa)    
Predicted Functional Partners:
CCL5
C-C motif chemokine ligand 5.
   
 0.991
ENSCAPP00000004617
annotation not available
    
 0.977
ENSCAPP00000008292
annotation not available
    
 0.955
GNAQ
G protein subunit alpha q.
   
  0.934
ENSCAPP00000013460
annotation not available
   
 0.933
JAK2
Janus kinase 2.
   
 0.921
CXCL10
C-X-C motif chemokine ligand 10.
   
 0.920
ENSCAPP00000005970
annotation not available
    
 0.918
ENSCAPP00000010873
annotation not available
  
0.918
ENSCAPP00000001106
annotation not available
  
0.917
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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