STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RTP1Receptor transporter protein 1. (227 aa)    
Predicted Functional Partners:
REEP1
Receptor accessory protein 1.
     
 0.798
GNG13
G protein subunit gamma 13.
      
 0.797
ADCY3
Adenylate cyclase 3.
      
 0.690
ISG15
ISG15 ubiquitin like modifier.
   
  
 0.672
RIC8B
RIC8 guanine nucleotide exchange factor B.
      
 0.663
REEP2
Receptor accessory protein 2.
     
 0.629
RTP2
Receptor transporter protein 2.
   
 
  0.617
ANKRD13C
Ankyrin repeat domain 13C.
      
 0.454
CNGA2
Cyclic nucleotide gated channel subunit alpha 2.
   
  
 0.451
GNAL
G protein subunit alpha L.
   
  
 0.442
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.